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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs145006696 chr12:102302446 TGGA/T 9.73E-5 399 14.57 19.17 13.15 KM Plot
LGG rs145045324 chr10:43404041 C/T 6.92E-6 404 15.7 12.12 17.07 KM Plot
LGG rs145156257 chr9:95455508 G/C 0.000148 407 15.17 17.7 7.12 KM Plot
LGG rs145271542 chr4:84454214 C/CAT 6.66E-16 403 14.9 18.27 5.17 KM Plot
LGG rs145276370 chr7:5064637 T/C 0.000214 404 15.35 14.53 12.03 KM Plot
LGG rs145572325 chr15:31958491 A/G 0.000167 402 15.77 15.2 11.8 KM Plot
LGG rs145610816 chr3:153672989 AT/A 0 404 15.15 16.47 0.23 KM Plot
LGG rs145661897 chr2:114462446 C/A 0 406 15.63 14.53 0.23 KM Plot
LGG rs145671870 chr6:36086691 G/GC 1.27E-14 404 15.3 18.58 5.3 KM Plot
LGG rs145878905 chr2:201749975 T/C 1.86E-6 404 15.17 17.2 4.45 KM Plot
LGG rs145919716 chr2:228083742 G/A 0 407 15.72 13.23 1.23 KM Plot
LGG rs145949838 chr6:151877827 AG/A 0.000188 406 15.73 12.9 2.53 KM Plot
LGG rs146061782 chr12:69721082 GTTTA/G 0.000184 403 14.95 14.77 18.2 KM Plot
LGG rs146085690 chr20:3328440 G/A 1.02E-7 406 15.97 11.55 6.83 KM Plot
LGG rs146172075 chr20:3349246 G/A 1.03E-7 406 15.83 11.63 6.83 KM Plot